Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 AL360270.3-201ENST00000609118 1348 ntBASIC10.61□□□□□ -0.71
RPL39P62891 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.61□□□□□ -0.71
RPL39P62891 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
RPL39P62891 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.61□□□□□ -0.71
RPL39P62891 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.61□□□□□ -0.71
RPL39P62891 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.61□□□□□ -0.71
RPL39P62891 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 KRT18P43-201ENST00000469825 1281 ntBASIC10.61□□□□□ -0.71
RPL39P62891 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.61□□□□□ -0.71
RPL39P62891 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 ALG1L8P-201ENST00000533887 760 ntBASIC10.61□□□□□ -0.71
RPL39P62891 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.61□□□□□ -0.71
RPL39P62891 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.61□□□□□ -0.71
RPL39P62891 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.61□□□□□ -0.71
RPL39P62891 RN7SL828P-201ENST00000607615 303 ntBASIC10.61□□□□□ -0.71
RPL39P62891 AL133215.2-201ENST00000609242 977 ntBASIC10.61□□□□□ -0.71
RPL39P62891 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 AC055717.3-201ENST00000622967 595 ntBASIC10.61□□□□□ -0.71
RPL39P62891 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
RPL39P62891 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.61□□□□□ -0.71
RPL39P62891 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.61□□□□□ -0.71
RPL39P62891 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
RPL39P62891 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RPL39P62891 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
RPL39P62891 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RPL39P62891 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
RPL39P62891 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RPL39P62891 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.6□□□□□ -0.71
RPL39P62891 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.6□□□□□ -0.71
RPL39P62891 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
RPL39P62891 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.6□□□□□ -0.71
RPL39P62891 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms