Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIPK4P57078 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RIPK4P57078 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.45■□□□□ 0.7
RIPK4P57078 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.44■□□□□ 0.7
RIPK4P57078 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.44■□□□□ 0.7
RIPK4P57078 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPK4P57078 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.44■□□□□ 0.7
RIPK4P57078 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.44■□□□□ 0.7
RIPK4P57078 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.44■□□□□ 0.7
RIPK4P57078 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.44■□□□□ 0.7
RIPK4P57078 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RIPK4P57078 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 AL008638.5-201ENST00000623814 1298 ntBASIC19.44■□□□□ 0.7
RIPK4P57078 AL162426.1-201ENST00000624141 743 ntBASIC19.44■□□□□ 0.7
RIPK4P57078 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPK4P57078 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIPK4P57078 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIPK4P57078 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.44■□□□□ 0.7
RIPK4P57078 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK4P57078 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
RIPK4P57078 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RIPK4P57078 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK4P57078 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK4P57078 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 POM121L10P-201ENST00000436994 1285 ntBASIC19.43■□□□□ 0.7
RIPK4P57078 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.43■□□□□ 0.7
RIPK4P57078 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.43■□□□□ 0.7
RIPK4P57078 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 AC027601.3-201ENST00000622907 509 ntBASIC19.43■□□□□ 0.7
RIPK4P57078 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 AC099063.4-201ENST00000641099 1602 ntBASIC19.43■□□□□ 0.7
RIPK4P57078 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.43■□□□□ 0.7
RIPK4P57078 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 AC106881.1-201ENST00000605849 3329 ntBASIC19.43■□□□□ 0.7
RIPK4P57078 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RIPK4P57078 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIPK4P57078 AL354702.1-201ENST00000442006 1960 ntBASIC19.43■□□□□ 0.7
RIPK4P57078 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.42■□□□□ 0.7
RIPK4P57078 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPK4P57078 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RIPK4P57078 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.42■□□□□ 0.7
RIPK4P57078 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 KLF2P1-201ENST00000447438 1042 ntBASIC19.42■□□□□ 0.7
RIPK4P57078 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.42■□□□□ 0.7
RIPK4P57078 ZNF767P-206ENST00000513792 565 ntBASIC19.42■□□□□ 0.7
RIPK4P57078 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RIPK4P57078 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIPK4P57078 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
RIPK4P57078 AC132192.2-201ENST00000596206 1147 ntBASIC19.42■□□□□ 0.7
RIPK4P57078 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms