Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN6P56747 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN6P56747 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLDN6P56747 RPS9P1-201ENST00000419943 583 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN6P56747 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN6P56747 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN6P56747 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN6P56747 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 RBM8B-201ENST00000555532 525 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CLDN6P56747 AC138894.2-201ENST00000602838 371 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 AL645728.2-202ENST00000641679 227 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN6P56747 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.29□□□□□ -0.12
CLDN6P56747 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN6P56747 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN6P56747 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN6P56747 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLDN6P56747 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 AL512430.1-201ENST00000392575 860 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 KRT8P21-201ENST00000430398 1491 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN6P56747 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN6P56747 AC079112.1-201ENST00000454972 939 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN6P56747 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN6P56747 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN6P56747 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms