Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDH8P55286 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDH8P55286 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.14
CDH8P55286 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
CDH8P55286 LINC00552-201ENST00000625151 2579 ntBASIC15.89■□□□□ 0.13
CDH8P55286 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 AL136172.1-201ENST00000598590 1394 ntBASIC15.89■□□□□ 0.13
CDH8P55286 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
CDH8P55286 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH8P55286 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 AL136309.1-201ENST00000403917 691 ntBASIC15.89■□□□□ 0.13
CDH8P55286 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.89■□□□□ 0.13
CDH8P55286 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 AC100850.1-201ENST00000506768 649 ntBASIC15.89■□□□□ 0.13
CDH8P55286 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH8P55286 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 RN7SL560P-201ENST00000577943 264 ntBASIC15.89■□□□□ 0.13
CDH8P55286 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH8P55286 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH8P55286 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH8P55286 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH8P55286 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH8P55286 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH8P55286 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH8P55286 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH8P55286 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 AL355994.2-201ENST00000447882 704 ntBASIC15.88■□□□□ 0.13
CDH8P55286 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH8P55286 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH8P55286 BX088702.1-201ENST00000610784 235 ntBASIC15.88■□□□□ 0.13
CDH8P55286 AP001002.3-201ENST00000623482 206 ntBASIC15.88■□□□□ 0.13
CDH8P55286 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH8P55286 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 AC139749.1-202ENST00000617529 3139 ntBASIC15.88■□□□□ 0.13
CDH8P55286 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH8P55286 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH8P55286 AC140479.7-201ENST00000636301 2332 ntBASIC15.88■□□□□ 0.13
CDH8P55286 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH8P55286 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH8P55286 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH8P55286 AL354702.1-201ENST00000442006 1960 ntBASIC15.87■□□□□ 0.13
CDH8P55286 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH8P55286 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH8P55286 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CDH8P55286 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH8P55286 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH8P55286 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH8P55286 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH8P55286 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms