Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC232323.1-201ENST00000540724 2099 ntBASIC16.81■□□□□ 0.28
EPHB4P54760 REXO1L5P-201ENST00000622260 2098 ntBASIC16.81■□□□□ 0.28
EPHB4P54760 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB4P54760 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EPHB4P54760 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EPHB4P54760 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB4P54760 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB4P54760 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB4P54760 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB4P54760 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.81■□□□□ 0.28
EPHB4P54760 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.81■□□□□ 0.28
EPHB4P54760 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
EPHB4P54760 ENPP7P14-201ENST00000621765 1040 ntBASIC16.81■□□□□ 0.28
EPHB4P54760 AC022748.3-201ENST00000621828 275 ntBASIC16.81■□□□□ 0.28
EPHB4P54760 HLA-C-210ENST00000640219 976 ntBASIC16.81■□□□□ 0.28
EPHB4P54760 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHB4P54760 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
EPHB4P54760 FLJ16779-201ENST00000612722 7638 ntBASIC16.81■□□□□ 0.28
EPHB4P54760 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EPHB4P54760 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB4P54760 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB4P54760 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHB4P54760 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
EPHB4P54760 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB4P54760 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHB4P54760 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.8■□□□□ 0.28
EPHB4P54760 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 FAM8A4P-201ENST00000435433 1213 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 AP003171.2-201ENST00000528208 925 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 AC073413.1-201ENST00000603927 732 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 AC073352.2-201ENST00000609385 439 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHB4P54760 AP001002.3-201ENST00000623482 206 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB4P54760 C18orf15-201ENST00000623680 2534 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB4P54760 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
EPHB4P54760 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 AC011477.6-201ENST00000604980 1927 ntBASIC16.8■□□□□ 0.28
EPHB4P54760 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB4P54760 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms