Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 RN7SL560P-201ENST00000577943 264 ntBASIC14.39□□□□□ -0.11
RAB28P51157 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB28P51157 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB28P51157 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB28P51157 AC244157.2-201ENST00000616239 1006 ntBASIC14.39□□□□□ -0.11
RAB28P51157 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB28P51157 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB28P51157 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB28P51157 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RAB28P51157 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 CICP24-201ENST00000605464 2705 ntBASIC14.39□□□□□ -0.11
RAB28P51157 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB28P51157 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 OR2I1P-209ENST00000641730 5365 ntBASIC14.38□□□□□ -0.11
RAB28P51157 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 MTHFR-210ENST00000641407 2387 ntBASIC14.38□□□□□ -0.11
RAB28P51157 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 AC015818.8-201ENST00000587907 1519 ntBASIC14.38□□□□□ -0.11
RAB28P51157 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 PUDPP3-201ENST00000445368 636 ntBASIC14.38□□□□□ -0.11
RAB28P51157 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB28P51157 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.38□□□□□ -0.11
RAB28P51157 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 AC008825.2-201ENST00000603374 718 ntBASIC14.38□□□□□ -0.11
RAB28P51157 AL136301.1-201ENST00000615830 422 ntBASIC14.38□□□□□ -0.11
RAB28P51157 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 AL033527.4-201ENST00000641026 673 ntBASIC14.38□□□□□ -0.11
RAB28P51157 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB28P51157 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB28P51157 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB28P51157 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.37□□□□□ -0.11
RAB28P51157 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB28P51157 MTX1P1-201ENST00000440904 838 ntBASIC14.37□□□□□ -0.11
RAB28P51157 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB28P51157 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB28P51157 RPL13AP20-201ENST00000459725 609 ntBASIC14.37□□□□□ -0.11
RAB28P51157 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB28P51157 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 FAM86HP-204ENST00000513466 959 ntBASIC14.37□□□□□ -0.11
RAB28P51157 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB28P51157 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB28P51157 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB28P51157 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms