Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MRE11P49959 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.52■□□□□ 0.4
MRE11P49959 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MRE11P49959 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.52■□□□□ 0.4
MRE11P49959 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRE11P49959 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MRE11P49959 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.52■□□□□ 0.39
MRE11P49959 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRE11P49959 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
MRE11P49959 INE2-201ENST00000630399 1874 ntBASIC17.52■□□□□ 0.39
MRE11P49959 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.52■□□□□ 0.39
MRE11P49959 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRE11P49959 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MRE11P49959 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRE11P49959 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MRE11P49959 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRE11P49959 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.51■□□□□ 0.39
MRE11P49959 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
MRE11P49959 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
MRE11P49959 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MRE11P49959 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.51■□□□□ 0.39
MRE11P49959 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.51■□□□□ 0.39
MRE11P49959 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.51■□□□□ 0.39
MRE11P49959 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.51■□□□□ 0.39
MRE11P49959 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MRE11P49959 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.51■□□□□ 0.39
MRE11P49959 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.51■□□□□ 0.39
MRE11P49959 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.51■□□□□ 0.39
MRE11P49959 SPTSSB-204ENST00000617024 1292 ntBASIC17.51■□□□□ 0.39
MRE11P49959 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRE11P49959 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MRE11P49959 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MRE11P49959 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MRE11P49959 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 AC092933.1-201ENST00000393644 945 ntBASIC17.5■□□□□ 0.39
MRE11P49959 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 ACA64.2-201ENST00000459014 129 ntBASIC17.5■□□□□ 0.39
MRE11P49959 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 GIMAP3P-201ENST00000495150 836 ntBASIC17.5■□□□□ 0.39
MRE11P49959 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.5■□□□□ 0.39
MRE11P49959 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 AC097359.3-201ENST00000603982 1210 ntBASIC17.5■□□□□ 0.39
MRE11P49959 AC004233.3-201ENST00000607794 1269 ntBASIC17.5■□□□□ 0.39
MRE11P49959 AC009118.2-201ENST00000613275 655 ntBASIC17.5■□□□□ 0.39
MRE11P49959 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 AP001059.3-201ENST00000619053 235 ntBASIC17.5■□□□□ 0.39
MRE11P49959 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
MRE11P49959 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.5■□□□□ 0.39
MRE11P49959 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
MRE11P49959 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRE11P49959 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
MRE11P49959 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms