Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.22□□□□□ -0.29
SOX2P48431 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.22□□□□□ -0.29
SOX2P48431 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SOX2P48431 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SOX2P48431 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.22□□□□□ -0.29
SOX2P48431 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 AC010327.4-202ENST00000591484 748 ntBASIC13.22□□□□□ -0.29
SOX2P48431 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.22□□□□□ -0.29
SOX2P48431 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SOX2P48431 AC089987.1-201ENST00000551654 2209 ntBASIC13.22□□□□□ -0.29
SOX2P48431 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.22□□□□□ -0.29
SOX2P48431 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SOX2P48431 AL137783.1-201ENST00000623494 1896 ntBASIC13.22□□□□□ -0.29
SOX2P48431 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SOX2P48431 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SOX2P48431 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.22□□□□□ -0.29
SOX2P48431 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SOX2P48431 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SOX2P48431 AL359881.3-201ENST00000602640 1721 ntBASIC13.22□□□□□ -0.29
SOX2P48431 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SOX2P48431 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.21□□□□□ -0.29
SOX2P48431 MBLAC2-202ENST00000514906 1936 ntBASIC13.21□□□□□ -0.29
SOX2P48431 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SOX2P48431 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 AC023090.2-201ENST00000625182 2110 ntBASIC13.21□□□□□ -0.29
SOX2P48431 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.21□□□□□ -0.29
SOX2P48431 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.21□□□□□ -0.29
SOX2P48431 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.21□□□□□ -0.29
SOX2P48431 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.21□□□□□ -0.29
SOX2P48431 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.21□□□□□ -0.29
SOX2P48431 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.21□□□□□ -0.29
SOX2P48431 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.21□□□□□ -0.29
SOX2P48431 HLA-V-204ENST00000476601 1289 ntBASIC13.21□□□□□ -0.29
SOX2P48431 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.21□□□□□ -0.29
SOX2P48431 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.21□□□□□ -0.29
SOX2P48431 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.21□□□□□ -0.29
SOX2P48431 MIR3687-2-201ENST00000577708 61 ntBASIC13.21□□□□□ -0.29
SOX2P48431 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.21□□□□□ -0.29
SOX2P48431 MIR3687-1-201ENST00000614492 61 ntBASIC13.21□□□□□ -0.29
SOX2P48431 AL138828.2-201ENST00000615812 383 ntBASIC13.21□□□□□ -0.29
SOX2P48431 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.21□□□□□ -0.29
SOX2P48431 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SOX2P48431 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SOX2P48431 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.21□□□□□ -0.3
SOX2P48431 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SOX2P48431 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.21□□□□□ -0.3
SOX2P48431 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SOX2P48431 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.21□□□□□ -0.3
SOX2P48431 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.21□□□□□ -0.3
SOX2P48431 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SOX2P48431 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SOX2P48431 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SOX2P48431 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
SOX2P48431 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.2□□□□□ -0.3
SOX2P48431 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SOX2P48431 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.2□□□□□ -0.3
SOX2P48431 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.2□□□□□ -0.3
SOX2P48431 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.2□□□□□ -0.3
SOX2P48431 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SOX2P48431 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SOX2P48431 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms