Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GABRA4P48169 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.07□□□□□ -0.16
GABRA4P48169 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GABRA4P48169 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GABRA4P48169 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 FNTAP2-201ENST00000430308 634 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 AL645933.1-201ENST00000440087 609 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 AC104073.2-201ENST00000453737 312 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.07□□□□□ -0.16
GABRA4P48169 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 RPL18P13-201ENST00000478088 569 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 HLA-J-204ENST00000495278 958 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.07□□□□□ -0.16
GABRA4P48169 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.07□□□□□ -0.16
GABRA4P48169 AC103988.2-201ENST00000561804 725 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 AC020914.3-201ENST00000594712 304 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 MIR6720-201ENST00000611664 98 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 AP000346.4-201ENST00000614827 381 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.07□□□□□ -0.16
GABRA4P48169 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
GABRA4P48169 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.07□□□□□ -0.16
GABRA4P48169 AL008718.2-201ENST00000609206 1313 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GABRA4P48169 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GABRA4P48169 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 TSPY26P-202ENST00000565928 3884 ntBASIC14.07□□□□□ -0.16
GABRA4P48169 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.07□□□□□ -0.16
GABRA4P48169 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GABRA4P48169 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.06□□□□□ -0.16
GABRA4P48169 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GABRA4P48169 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GABRA4P48169 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GABRA4P48169 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.06□□□□□ -0.16
GABRA4P48169 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.06□□□□□ -0.16
GABRA4P48169 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 AC012441.2-201ENST00000444843 739 ntBASIC14.06□□□□□ -0.16
GABRA4P48169 AL035414.1-201ENST00000451327 857 ntBASIC14.06□□□□□ -0.16
GABRA4P48169 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 AC022217.1-201ENST00000521069 738 ntBASIC14.06□□□□□ -0.16
GABRA4P48169 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.06□□□□□ -0.16
GABRA4P48169 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.06□□□□□ -0.16
GABRA4P48169 AL645939.5-201ENST00000606834 243 ntBASIC14.06□□□□□ -0.16
GABRA4P48169 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.06□□□□□ -0.16
GABRA4P48169 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
GABRA4P48169 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
GABRA4P48169 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.06□□□□□ -0.16
GABRA4P48169 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 AC018529.2-202ENST00000611482 3087 ntBASIC14.06□□□□□ -0.16
GABRA4P48169 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GABRA4P48169 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms