Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 CICP12-201ENST00000455801 843 ntBASIC17.48■□□□□ 0.39
NEDD4P46934 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.48■□□□□ 0.39
NEDD4P46934 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.48■□□□□ 0.39
NEDD4P46934 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.48■□□□□ 0.39
NEDD4P46934 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.48■□□□□ 0.39
NEDD4P46934 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NEDD4P46934 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.48■□□□□ 0.39
NEDD4P46934 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.48■□□□□ 0.39
NEDD4P46934 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEDD4P46934 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.48■□□□□ 0.39
NEDD4P46934 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.47■□□□□ 0.39
NEDD4P46934 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.47■□□□□ 0.39
NEDD4P46934 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.47■□□□□ 0.39
NEDD4P46934 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.47■□□□□ 0.39
NEDD4P46934 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 AC132192.2-201ENST00000596206 1147 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 AC244157.2-201ENST00000616239 1006 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 AC018735.1-201ENST00000437208 1502 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEDD4P46934 AL354877.1-201ENST00000424412 413 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.47■□□□□ 0.39
NEDD4P46934 AC022447.6-201ENST00000515522 438 ntBASIC17.47■□□□□ 0.39
NEDD4P46934 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NEDD4P46934 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.47■□□□□ 0.39
NEDD4P46934 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.47■□□□□ 0.39
NEDD4P46934 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NEDD4P46934 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.46■□□□□ 0.39
NEDD4P46934 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.46■□□□□ 0.39
NEDD4P46934 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.46■□□□□ 0.39
NEDD4P46934 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NEDD4P46934 KRT8P28-201ENST00000433288 1390 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms