Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 AC010327.5-201ENST00000586923 3061 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 AC092135.3-201ENST00000624151 1846 ntBASIC13.78□□□□□ -0.2
SLC1A3P43003 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.78□□□□□ -0.2
SLC1A3P43003 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A3P43003 CRB3P1-201ENST00000449338 276 ntBASIC13.78□□□□□ -0.2
SLC1A3P43003 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 KRT18P25-201ENST00000508931 1278 ntBASIC13.78□□□□□ -0.2
SLC1A3P43003 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 AC009486.1-201ENST00000569860 813 ntBASIC13.78□□□□□ -0.2
SLC1A3P43003 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A3P43003 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 AL033527.5-201ENST00000641382 801 ntBASIC13.78□□□□□ -0.2
SLC1A3P43003 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A3P43003 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SLC1A3P43003 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A3P43003 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A3P43003 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A3P43003 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A3P43003 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SLC1A3P43003 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SLC1A3P43003 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A3P43003 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SLC1A3P43003 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
SLC1A3P43003 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SLC1A3P43003 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SLC1A3P43003 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SLC1A3P43003 DGCR5-201ENST00000399539 862 ntBASIC13.77□□□□□ -0.21
SLC1A3P43003 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC1A3P43003 AC152010.1-201ENST00000415779 2006 ntBASIC13.77□□□□□ -0.21
SLC1A3P43003 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A3P43003 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 GIMAP3P-201ENST00000495150 836 ntBASIC13.77□□□□□ -0.21
SLC1A3P43003 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SLC1A3P43003 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A3P43003 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A3P43003 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A3P43003 WASH4P-201ENST00000564273 1246 ntBASIC13.77□□□□□ -0.21
SLC1A3P43003 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.77□□□□□ -0.21
SLC1A3P43003 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.77□□□□□ -0.21
SLC1A3P43003 CLUHP6-201ENST00000580789 941 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms