Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 AL080243.2-201ENST00000418783 582 ntBASIC13.08□□□□□ -0.32
GDNFP39905 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.08□□□□□ -0.32
GDNFP39905 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.08□□□□□ -0.32
GDNFP39905 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.08□□□□□ -0.32
GDNFP39905 TMEM198B-204ENST00000484016 896 ntBASIC13.08□□□□□ -0.32
GDNFP39905 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.08□□□□□ -0.32
GDNFP39905 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.08□□□□□ -0.32
GDNFP39905 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GDNFP39905 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.08□□□□□ -0.32
GDNFP39905 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
GDNFP39905 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.08□□□□□ -0.32
GDNFP39905 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GDNFP39905 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 AC015818.8-201ENST00000587907 1519 ntBASIC13.08□□□□□ -0.32
GDNFP39905 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
GDNFP39905 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GDNFP39905 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.07□□□□□ -0.32
GDNFP39905 RPL37AP1-201ENST00000412502 279 ntBASIC13.07□□□□□ -0.32
GDNFP39905 CNN2P2-201ENST00000443536 909 ntBASIC13.07□□□□□ -0.32
GDNFP39905 CNN2P3-201ENST00000450201 906 ntBASIC13.07□□□□□ -0.32
GDNFP39905 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.07□□□□□ -0.32
GDNFP39905 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
GDNFP39905 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.07□□□□□ -0.32
GDNFP39905 AL136317.3-201ENST00000618497 906 ntBASIC13.07□□□□□ -0.32
GDNFP39905 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.07□□□□□ -0.32
GDNFP39905 DMBT1P1-203ENST00000636837 4628 ntBASIC13.07□□□□□ -0.32
GDNFP39905 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 NUTM2HP-201ENST00000442076 2498 ntBASIC13.07□□□□□ -0.32
GDNFP39905 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GDNFP39905 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GDNFP39905 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
GDNFP39905 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GDNFP39905 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GDNFP39905 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
GDNFP39905 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 AL354702.1-201ENST00000442006 1960 ntBASIC13.07□□□□□ -0.32
GDNFP39905 KRT8P12-202ENST00000472924 1397 ntBASIC13.07□□□□□ -0.32
GDNFP39905 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GDNFP39905 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
GDNFP39905 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GDNFP39905 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms