Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 AL442647.2-201ENST00000429864 857 ntBASIC14.28□□□□□ -0.12
GPC1P35052 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.28□□□□□ -0.12
GPC1P35052 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.28□□□□□ -0.12
GPC1P35052 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
GPC1P35052 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.28□□□□□ -0.12
GPC1P35052 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC1P35052 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.28□□□□□ -0.12
GPC1P35052 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 AC005912.2-201ENST00000619492 2400 ntBASIC14.28□□□□□ -0.12
GPC1P35052 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.28□□□□□ -0.12
GPC1P35052 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC1P35052 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GPC1P35052 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.28□□□□□ -0.12
GPC1P35052 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
GPC1P35052 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.27□□□□□ -0.12
GPC1P35052 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
GPC1P35052 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
GPC1P35052 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GPC1P35052 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
GPC1P35052 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GPC1P35052 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 AC010740.1-201ENST00000417035 684 ntBASIC14.27□□□□□ -0.13
GPC1P35052 HLA-K-203ENST00000430151 1046 ntBASIC14.27□□□□□ -0.13
GPC1P35052 MYCLP2-201ENST00000449268 967 ntBASIC14.27□□□□□ -0.13
GPC1P35052 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.27□□□□□ -0.13
GPC1P35052 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 SPDYE22P-201ENST00000582158 798 ntBASIC14.27□□□□□ -0.13
GPC1P35052 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.27□□□□□ -0.13
GPC1P35052 AC133539.2-201ENST00000604757 467 ntBASIC14.27□□□□□ -0.13
GPC1P35052 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.27□□□□□ -0.13
GPC1P35052 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.27□□□□□ -0.13
GPC1P35052 AC008761.3-201ENST00000624803 892 ntBASIC14.27□□□□□ -0.13
GPC1P35052 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GPC1P35052 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GPC1P35052 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GPC1P35052 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GPC1P35052 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
GPC1P35052 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC1P35052 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC1P35052 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GPC1P35052 AC140479.7-201ENST00000636301 2332 ntBASIC14.26□□□□□ -0.13
GPC1P35052 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GPC1P35052 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
GPC1P35052 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms