Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 DLX4-206ENST00000611342 1662 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.29□□□□□ -0.28
CD40LGP29965 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 RPS8P6-201ENST00000426177 609 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 EEF1DP4-201ENST00000446006 880 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.29□□□□□ -0.28
CD40LGP29965 AC108073.2-201ENST00000464002 357 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 RPL13AP23-201ENST00000480739 586 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 RNA5SP415-201ENST00000517246 115 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 UNC93B6-202ENST00000528242 690 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.29□□□□□ -0.28
CD40LGP29965 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.29□□□□□ -0.28
CD40LGP29965 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CD40LGP29965 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 AL078644.1-201ENST00000609881 752 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 IL9RP2-201ENST00000423948 1312 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 AC072061.1-201ENST00000569710 2234 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CD40LGP29965 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 AC024075.2-201ENST00000598112 1473 ntBASIC13.29□□□□□ -0.28
CD40LGP29965 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CD40LGP29965 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD40LGP29965 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
CD40LGP29965 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 AP001972.5-201ENST00000624624 2338 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40LGP29965 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CD40LGP29965 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 AC136604.1-201ENST00000418535 575 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms