Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VARSP26640 AC006504.5-208ENST00000588784 2401 ntBASIC14.8□□□□□ -0.04
VARSP26640 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 AC079776.1-201ENST00000401540 1152 ntBASIC14.79□□□□□ -0.04
VARSP26640 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 AC112492.5-201ENST00000421897 457 ntBASIC14.79□□□□□ -0.04
VARSP26640 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 AL138799.1-201ENST00000448213 1675 ntBASIC14.79□□□□□ -0.04
VARSP26640 AC022210.1-201ENST00000449856 793 ntBASIC14.79□□□□□ -0.04
VARSP26640 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.79□□□□□ -0.04
VARSP26640 AC004066.1-201ENST00000502488 802 ntBASIC14.79□□□□□ -0.04
VARSP26640 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.79□□□□□ -0.04
VARSP26640 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.79□□□□□ -0.04
VARSP26640 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.79□□□□□ -0.04
VARSP26640 AC007787.1-201ENST00000588095 1583 ntBASIC14.79□□□□□ -0.04
VARSP26640 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 AC015936.2-201ENST00000593177 259 ntBASIC14.79□□□□□ -0.04
VARSP26640 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.79□□□□□ -0.04
VARSP26640 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
VARSP26640 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.79□□□□□ -0.04
VARSP26640 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VARSP26640 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VARSP26640 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VARSP26640 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 INTS4P2-202ENST00000614726 2019 ntBASIC14.78□□□□□ -0.04
VARSP26640 AL157414.3-201ENST00000624276 1954 ntBASIC14.78□□□□□ -0.04
VARSP26640 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VARSP26640 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VARSP26640 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.78□□□□□ -0.04
VARSP26640 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 AC073869.1-201ENST00000415574 2762 ntBASIC14.78□□□□□ -0.04
VARSP26640 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 KRT43P-201ENST00000434019 910 ntBASIC14.78□□□□□ -0.04
VARSP26640 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VARSP26640 MYCLP2-201ENST00000449268 967 ntBASIC14.78□□□□□ -0.04
VARSP26640 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.78□□□□□ -0.04
VARSP26640 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.78□□□□□ -0.04
VARSP26640 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.78□□□□□ -0.04
VARSP26640 ACTG1P22-201ENST00000603793 1099 ntBASIC14.78□□□□□ -0.04
VARSP26640 AC133552.6-201ENST00000613406 534 ntBASIC14.78□□□□□ -0.04
VARSP26640 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.78□□□□□ -0.04
VARSP26640 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.78□□□□□ -0.04
VARSP26640 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.78□□□□□ -0.04
VARSP26640 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.78□□□□□ -0.04
VARSP26640 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VARSP26640 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VARSP26640 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.78□□□□□ -0.04
VARSP26640 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VARSP26640 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VARSP26640 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
VARSP26640 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms