Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RABGGTA-203ENST00000543002 1329 ntTSL 219.44■□□□□ 0.74e-6■■□□□ 13.2
U2AF2P26368 CEP250-205ENST00000425096 629 ntTSL 319.42■□□□□ 0.74e-6■■□□□ 13.2
U2AF2P26368 SPHK2-209ENST00000599033 618 ntTSL 319.4■□□□□ 0.74e-6■■□□□ 13.2
U2AF2P26368 AFF4-209ENST00000491831 1667 ntTSL 1 (best)19.36■□□□□ 0.694e-6■■□□□ 13.2
U2AF2P26368 AP3S1-208ENST00000515066 1670 ntTSL 219.33■□□□□ 0.694e-6■■□□□ 13.2
U2AF2P26368 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.3■□□□□ 0.684e-6■■□□□ 13.2
U2AF2P26368 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.674e-6■■□□□ 13.2
U2AF2P26368 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.18■□□□□ 0.664e-6■■□□□ 13.2
U2AF2P26368 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.652e-8■■□□□ 13.2
U2AF2P26368 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.02■□□□□ 0.644e-6■■□□□ 13.2
U2AF2P26368 WDR41-219ENST00000511791 429 ntTSL 318.89■□□□□ 0.614e-6■■□□□ 13.2
U2AF2P26368 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.612e-8■■□□□ 13.2
U2AF2P26368 RBM34-204ENST00000468751 648 ntTSL 218.64■□□□□ 0.574e-6■■□□□ 13.2
U2AF2P26368 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.554e-6■■□□□ 13.2
U2AF2P26368 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.48■□□□□ 0.554e-6■■□□□ 13.2
U2AF2P26368 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.45■□□□□ 0.544e-6■■□□□ 13.2
U2AF2P26368 FASTK-210ENST00000478477 826 ntTSL 318.41■□□□□ 0.544e-6■■□□□ 13.2
U2AF2P26368 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.39■□□□□ 0.534e-6■■□□□ 13.2
U2AF2P26368 PCMT1-204ENST00000460828 582 ntTSL 518.34■□□□□ 0.535e-11■■□□□ 13.2
U2AF2P26368 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18■□□□□ 0.474e-6■■□□□ 13.2
U2AF2P26368 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.474e-6■■□□□ 13.2
U2AF2P26368 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.97■□□□□ 0.474e-6■■□□□ 13.2
U2AF2P26368 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.94■□□□□ 0.464e-6■■□□□ 13.2
U2AF2P26368 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.89■□□□□ 0.454e-6■■□□□ 13.2
U2AF2P26368 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.454e-6■■□□□ 13.2
U2AF2P26368 INTS10-210ENST00000521357 876 ntTSL 517.84■□□□□ 0.454e-6■■□□□ 13.2
U2AF2P26368 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.82■□□□□ 0.444e-6■■□□□ 13.2
U2AF2P26368 MAD1L1-210ENST00000444373 535 ntTSL 417.81■□□□□ 0.444e-6■■□□□ 13.2
U2AF2P26368 LDHA-209ENST00000478970 732 ntTSL 217.78■□□□□ 0.442e-8■■□□□ 13.2
U2AF2P26368 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.434e-6■■□□□ 13.2
U2AF2P26368 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.414e-6■■□□□ 13.2
U2AF2P26368 WDR41-206ENST00000506307 582 ntTSL 317.44■□□□□ 0.384e-6■■□□□ 13.2
U2AF2P26368 MPZL2-204ENST00000527282 908 ntTSL 217.43■□□□□ 0.384e-6■■□□□ 13.2
U2AF2P26368 SPHK2-207ENST00000598574 1786 nt17.38■□□□□ 0.374e-6■■□□□ 13.2
U2AF2P26368 WWP2-207ENST00000566463 1971 ntTSL 217.3■□□□□ 0.364e-6■■□□□ 13.2
U2AF2P26368 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.25■□□□□ 0.354e-6■■□□□ 13.2
U2AF2P26368 SPHK2-204ENST00000593308 713 ntTSL 317.11■□□□□ 0.334e-6■■□□□ 13.2
U2AF2P26368 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.332e-8■■□□□ 13.2
U2AF2P26368 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.34e-6■■□□□ 13.2
U2AF2P26368 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.284e-6■■□□□ 13.2
U2AF2P26368 ZFAND5-208ENST00000488164 3020 ntTSL 516.77■□□□□ 0.272e-8■■□□□ 13.2
U2AF2P26368 MPZL2-203ENST00000525647 476 ntTSL 416.74■□□□□ 0.274e-6■■□□□ 13.2
U2AF2P26368 PHLDB2-215ENST00000498699 3646 ntTSL 1 (best)16.71■□□□□ 0.274e-6■■□□□ 13.2
U2AF2P26368 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.264e-6■■□□□ 13.2
U2AF2P26368 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.264e-6■■□□□ 13.2
U2AF2P26368 PCMT1-210ENST00000495487 548 ntTSL 316.62■□□□□ 0.255e-11■■□□□ 13.2
U2AF2P26368 CACNB4-271ENST00000638056 605 ntTSL 516.58■□□□□ 0.244e-6■■□□□ 13.2
U2AF2P26368 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC16.57■□□□□ 0.244e-6■■□□□ 13.2
U2AF2P26368 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.224e-6■■□□□ 13.2
U2AF2P26368 DCP2-205ENST00000510046 369 ntTSL 216.19■□□□□ 0.182e-8■■□□□ 13.2
U2AF2P26368 WWP2-217ENST00000569297 2462 ntTSL 216.12■□□□□ 0.174e-6■■□□□ 13.2
U2AF2P26368 MPZL2-206ENST00000529376 1531 ntTSL 216.04■□□□□ 0.164e-6■■□□□ 13.2
U2AF2P26368 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.154e-6■■□□□ 13.2
U2AF2P26368 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.154e-6■■□□□ 13.2
U2AF2P26368 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.144e-6■■□□□ 13.2
U2AF2P26368 ZNF318-202ENST00000605935 3836 ntTSL 1 (best)15.87■□□□□ 0.132e-8■■□□□ 13.2
U2AF2P26368 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.81■□□□□ 0.124e-6■■□□□ 13.2
U2AF2P26368 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.124e-6■■□□□ 13.2
U2AF2P26368 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15.77■□□□□ 0.124e-6■■□□□ 13.2
U2AF2P26368 CCDC40-209ENST00000573474 554 ntTSL 415.77■□□□□ 0.124e-6■■□□□ 13.2
U2AF2P26368 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.094e-6■■□□□ 13.2
U2AF2P26368 MAD1L1-209ENST00000438959 839 ntTSL 315.53■□□□□ 0.084e-6■■□□□ 13.2
U2AF2P26368 TARS2-212ENST00000480070 832 ntTSL 515.51■□□□□ 0.074e-6■■□□□ 13.2
U2AF2P26368 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.054e-6■■□□□ 13.2
U2AF2P26368 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.054e-6■■□□□ 13.2
U2AF2P26368 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.054e-6■■□□□ 13.2
U2AF2P26368 PRPF39-204ENST00000553605 582 ntTSL 315.09■□□□□ 0.014e-6■■□□□ 13.2
U2AF2P26368 ACOT2-202ENST00000538782 1578 ntTSL 215.07■□□□□ 04e-6■■□□□ 13.2
U2AF2P26368 SFXN5-212ENST00000475630 422 ntTSL 314.99□□□□□ -0.012e-12■■□□□ 13.2
U2AF2P26368 SORBS2-242ENST00000463104 567 ntTSL 514.85□□□□□ -0.034e-6■■□□□ 13.2
U2AF2P26368 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.044e-6■■□□□ 13.2
U2AF2P26368 C12orf4-205ENST00000541014 1049 ntTSL 514.78□□□□□ -0.044e-6■■□□□ 13.2
U2AF2P26368 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.062e-8■■□□□ 13.2
U2AF2P26368 TSEN2-206ENST00000446004 1239 ntTSL 514.54□□□□□ -0.084e-6■■□□□ 13.2
U2AF2P26368 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC14.46□□□□□ -0.094e-6■■□□□ 13.2
U2AF2P26368 WWP2-210ENST00000567579 527 ntTSL 514.44□□□□□ -0.14e-6■■□□□ 13.2
U2AF2P26368 RBM34-202ENST00000429912 667 ntTSL 314.44□□□□□ -0.14e-6■■□□□ 13.2
U2AF2P26368 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.114e-6■■□□□ 13.2
U2AF2P26368 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.114e-6■■□□□ 13.2
U2AF2P26368 WWP2-212ENST00000568185 590 ntTSL 414.23□□□□□ -0.134e-6■■□□□ 13.2
U2AF2P26368 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.17□□□□□ -0.144e-6■■□□□ 13.2
U2AF2P26368 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.144e-6■■□□□ 13.2
U2AF2P26368 LARGE1-215ENST00000609799 581 ntTSL 514.05□□□□□ -0.164e-6■■□□□ 13.2
U2AF2P26368 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC13.98□□□□□ -0.174e-6■■□□□ 13.2
U2AF2P26368 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.194e-6■■□□□ 13.2
U2AF2P26368 VTA1-203ENST00000452973 3177 ntTSL 2 BASIC13.6□□□□□ -0.234e-6■■□□□ 13.2
U2AF2P26368 PRRC2B-204ENST00000422467 535 ntTSL 513.56□□□□□ -0.244e-6■■□□□ 13.2
U2AF2P26368 LARGE1-216ENST00000610186 1736 ntTSL 513.51□□□□□ -0.254e-6■■□□□ 13.2
U2AF2P26368 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC13.47□□□□□ -0.254e-6■■□□□ 13.2
U2AF2P26368 CACNB4-266ENST00000637913 2034 ntTSL 513.4□□□□□ -0.264e-6■■□□□ 13.2
U2AF2P26368 AP5M1-206ENST00000555448 817 ntTSL 313.38□□□□□ -0.274e-6■■□□□ 13.2
U2AF2P26368 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-6■■□□□ 13.2
U2AF2P26368 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-6■■□□□ 13.2
U2AF2P26368 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.32e-8■■□□□ 13.2
U2AF2P26368 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.34e-6■■□□□ 13.2
U2AF2P26368 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.322e-8■■□□□ 13.2
U2AF2P26368 RBM34-205ENST00000474086 882 ntTSL 213.06□□□□□ -0.324e-6■■□□□ 13.2
U2AF2P26368 LDHA-222ENST00000543695 554 ntTSL 513.01□□□□□ -0.332e-8■■□□□ 13.2
U2AF2P26368 LDHA-211ENST00000494573 1154 ntTSL 213.01□□□□□ -0.332e-8■■□□□ 13.2
U2AF2P26368 CTNNA1-237ENST00000523275 536 ntTSL 512.99□□□□□ -0.334e-6■■□□□ 13.2
Retrieved 100 of 36,523 protein–RNA pairs in 219.5 ms