Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.69■□□□□ 0.1
RARAP10276 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 ACTBP8-201ENST00000403258 1108 ntBASIC15.69■□□□□ 0.1
RARAP10276 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
RARAP10276 GIMAP3P-201ENST00000495150 836 ntBASIC15.69■□□□□ 0.1
RARAP10276 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.69■□□□□ 0.1
RARAP10276 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.69■□□□□ 0.1
RARAP10276 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RARAP10276 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.69■□□□□ 0.1
RARAP10276 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RARAP10276 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 LRRC59-203ENST00000576448 1531 ntBASIC15.68■□□□□ 0.1
RARAP10276 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.68■□□□□ 0.1
RARAP10276 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.68■□□□□ 0.1
RARAP10276 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.68■□□□□ 0.1
RARAP10276 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.68■□□□□ 0.1
RARAP10276 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.68■□□□□ 0.1
RARAP10276 CRB3P1-201ENST00000449338 276 ntBASIC15.68■□□□□ 0.1
RARAP10276 AC022137.2-201ENST00000503482 481 ntBASIC15.68■□□□□ 0.1
RARAP10276 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.68■□□□□ 0.1
RARAP10276 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.68■□□□□ 0.1
RARAP10276 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 MSTO2P-201ENST00000314835 1709 ntBASIC15.68■□□□□ 0.1
RARAP10276 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.68■□□□□ 0.1
RARAP10276 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RARAP10276 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RARAP10276 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.67■□□□□ 0.1
RARAP10276 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.67■□□□□ 0.1
RARAP10276 AGGF1P1-201ENST00000509500 2073 ntBASIC15.67■□□□□ 0.1
RARAP10276 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.67■□□□□ 0.1
RARAP10276 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.67■□□□□ 0.1
RARAP10276 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RARAP10276 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.67■□□□□ 0.1
RARAP10276 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.67■□□□□ 0.1
RARAP10276 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RARAP10276 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.67■□□□□ 0.1
RARAP10276 MBLAC2-202ENST00000514906 1936 ntBASIC15.67■□□□□ 0.1
RARAP10276 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.67■□□□□ 0.1
RARAP10276 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.67■□□□□ 0.1
RARAP10276 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RARAP10276 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.67■□□□□ 0.1
RARAP10276 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms