Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC148477.4-201ENST00000613430 1793 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 UFM1-202ENST00000379649 846 ntTSL 4 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 MIR648-201ENST00000385046 94 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CHMP1AP1-201ENST00000445563 662 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC114501.1-201ENST00000445949 172 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC019193.1-201ENST00000506678 823 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 MIR3147-201ENST00000577811 66 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AL133499.1-201ENST00000596207 608 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC022748.3-201ENST00000621828 275 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AC011491.1-203ENST00000637688 543 ntBASIC11.06□□□□□ -0.64
NHLRC4P0CG21 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NHLRC4P0CG21 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 CICP8-201ENST00000455800 2813 ntBASIC11.05□□□□□ -0.64
NHLRC4P0CG21 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NHLRC4P0CG21 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms