Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP2P08253 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.96□□□□□ -0.01
MMP2P08253 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.96□□□□□ -0.01
MMP2P08253 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MMP2P08253 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.96□□□□□ -0.01
MMP2P08253 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MMP2P08253 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP2P08253 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP2P08253 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MMP2P08253 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
MMP2P08253 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MMP2P08253 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MMP2P08253 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MMP2P08253 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.96□□□□□ -0.02
MMP2P08253 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MMP2P08253 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.96□□□□□ -0.02
MMP2P08253 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MMP2P08253 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.02
MMP2P08253 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
MMP2P08253 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
MMP2P08253 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
MMP2P08253 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 AC005089.1-201ENST00000619486 2241 ntBASIC14.95□□□□□ -0.02
MMP2P08253 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.95□□□□□ -0.02
MMP2P08253 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 AC010141.1-201ENST00000411585 623 ntBASIC14.95□□□□□ -0.02
MMP2P08253 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 AL355994.2-201ENST00000447882 704 ntBASIC14.95□□□□□ -0.02
MMP2P08253 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 HOMER2P2-201ENST00000451621 847 ntBASIC14.95□□□□□ -0.02
MMP2P08253 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.95□□□□□ -0.02
MMP2P08253 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.95□□□□□ -0.02
MMP2P08253 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.95□□□□□ -0.02
MMP2P08253 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
MMP2P08253 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.95□□□□□ -0.02
MMP2P08253 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.95□□□□□ -0.02
MMP2P08253 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.95□□□□□ -0.02
MMP2P08253 AL023775.1-201ENST00000454907 1746 ntBASIC14.95□□□□□ -0.02
MMP2P08253 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
MMP2P08253 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MMP2P08253 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 AC215219.1-201ENST00000400706 1817 ntBASIC14.94□□□□□ -0.02
MMP2P08253 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.94□□□□□ -0.02
MMP2P08253 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MMP2P08253 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 KRT223P-202ENST00000449164 1292 ntBASIC14.94□□□□□ -0.02
MMP2P08253 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 DUX4L45-201ENST00000566406 1057 ntBASIC14.94□□□□□ -0.02
MMP2P08253 MIR4783-201ENST00000580343 82 ntBASIC14.94□□□□□ -0.02
MMP2P08253 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.94□□□□□ -0.02
MMP2P08253 AC133552.6-201ENST00000613406 534 ntBASIC14.94□□□□□ -0.02
MMP2P08253 MIR6805-201ENST00000615055 62 ntBASIC14.94□□□□□ -0.02
MMP2P08253 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
MMP2P08253 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP2P08253 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MMP2P08253 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms