Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM3P06753 HTR5BP-201ENST00000430851 1154 ntBASIC16.81■□□□□ 0.28
TPM3P06753 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM3P06753 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM3P06753 SLC25A1P1-201ENST00000528351 927 ntBASIC16.81■□□□□ 0.28
TPM3P06753 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 AL079307.3-201ENST00000556114 283 ntBASIC16.81■□□□□ 0.28
TPM3P06753 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM3P06753 SAMD11P1-201ENST00000571429 661 ntBASIC16.81■□□□□ 0.28
TPM3P06753 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 AC120114.3-201ENST00000611923 658 ntBASIC16.81■□□□□ 0.28
TPM3P06753 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM3P06753 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TPM3P06753 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM3P06753 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TPM3P06753 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM3P06753 AL121723.1-201ENST00000445194 1519 ntBASIC16.8■□□□□ 0.28
TPM3P06753 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.8■□□□□ 0.28
TPM3P06753 AC022145.2-201ENST00000598203 171 ntBASIC16.8■□□□□ 0.28
TPM3P06753 MTDHP5-201ENST00000598980 586 ntBASIC16.8■□□□□ 0.28
TPM3P06753 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
TPM3P06753 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM3P06753 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM3P06753 AC023794.5-201ENST00000564380 2157 ntBASIC16.79■□□□□ 0.28
TPM3P06753 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM3P06753 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
TPM3P06753 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 CR383656.2-201ENST00000548656 2254 ntBASIC16.79■□□□□ 0.28
TPM3P06753 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TPM3P06753 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 KRT18P64-201ENST00000434946 1219 ntBASIC16.79■□□□□ 0.28
TPM3P06753 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.79■□□□□ 0.28
TPM3P06753 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.79■□□□□ 0.28
TPM3P06753 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TPM3P06753 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.79■□□□□ 0.28
TPM3P06753 AC025048.3-201ENST00000590609 569 ntBASIC16.79■□□□□ 0.28
TPM3P06753 AC005702.4-201ENST00000618393 416 ntBASIC16.79■□□□□ 0.28
TPM3P06753 LINC00628-201ENST00000628516 1289 ntBASIC16.79■□□□□ 0.28
TPM3P06753 AC105339.1-204ENST00000636249 355 ntBASIC16.79■□□□□ 0.28
TPM3P06753 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms