Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RN7SL574P-201ENST00000581512 297 ntBASIC16.26■□□□□ 0.19
VTNP04004 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VTNP04004 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 NORAD-201ENST00000565493 5339 ntBASIC16.25■□□□□ 0.19
VTNP04004 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.25■□□□□ 0.19
VTNP04004 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 AL157791.1-201ENST00000553667 1699 ntBASIC16.25■□□□□ 0.19
VTNP04004 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.25■□□□□ 0.19
VTNP04004 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.25■□□□□ 0.19
VTNP04004 AL645933.1-201ENST00000440087 609 ntBASIC16.25■□□□□ 0.19
VTNP04004 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.25■□□□□ 0.19
VTNP04004 AC012618.1-201ENST00000461223 412 ntBASIC16.25■□□□□ 0.19
VTNP04004 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.25■□□□□ 0.19
VTNP04004 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.25■□□□□ 0.19
VTNP04004 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
VTNP04004 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.25■□□□□ 0.19
VTNP04004 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.25■□□□□ 0.19
VTNP04004 AL132994.2-201ENST00000603120 687 ntBASIC16.25■□□□□ 0.19
VTNP04004 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.25■□□□□ 0.19
VTNP04004 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.25■□□□□ 0.19
VTNP04004 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VTNP04004 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
VTNP04004 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.24■□□□□ 0.19
VTNP04004 MRPL37P1-201ENST00000592451 1337 ntBASIC16.24■□□□□ 0.19
VTNP04004 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
VTNP04004 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VTNP04004 TCAF2P1-201ENST00000291129 2421 ntBASIC16.24■□□□□ 0.19
VTNP04004 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.24■□□□□ 0.19
VTNP04004 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.24■□□□□ 0.19
VTNP04004 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.24■□□□□ 0.19
VTNP04004 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VTNP04004 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 RN7SKP214-201ENST00000364208 315 ntBASIC16.24■□□□□ 0.19
VTNP04004 NUP210P1-202ENST00000504322 710 ntBASIC16.24■□□□□ 0.19
VTNP04004 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.24■□□□□ 0.19
VTNP04004 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.24■□□□□ 0.19
VTNP04004 FGFR3P5-201ENST00000564496 886 ntBASIC16.24■□□□□ 0.19
VTNP04004 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.24■□□□□ 0.19
VTNP04004 AP000346.4-201ENST00000614827 381 ntBASIC16.24■□□□□ 0.19
VTNP04004 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.24■□□□□ 0.19
VTNP04004 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.24■□□□□ 0.19
VTNP04004 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.24■□□□□ 0.19
VTNP04004 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VTNP04004 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VTNP04004 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.24■□□□□ 0.19
VTNP04004 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms