Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 Z82170.1-201ENST00000625081 3192 ntBASIC14.17□□□□□ -0.14
MT-ND1P03886 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
MT-ND1P03886 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MT-ND1P03886 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MT-ND1P03886 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MT-ND1P03886 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 AC027612.1-201ENST00000445234 2395 ntBASIC14.16□□□□□ -0.14
MT-ND1P03886 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.16□□□□□ -0.14
MT-ND1P03886 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 LINC01115-203ENST00000606068 577 ntBASIC14.16□□□□□ -0.14
MT-ND1P03886 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 LINC00628-201ENST00000628516 1289 ntBASIC14.16□□□□□ -0.14
MT-ND1P03886 AL645728.2-202ENST00000641679 227 ntBASIC14.16□□□□□ -0.14
MT-ND1P03886 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 AC018665.1-201ENST00000622927 1362 ntBASIC14.16□□□□□ -0.14
MT-ND1P03886 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MT-ND1P03886 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
MT-ND1P03886 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MT-ND1P03886 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
MT-ND1P03886 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.15□□□□□ -0.14
MT-ND1P03886 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.15□□□□□ -0.14
MT-ND1P03886 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 SNHG9-202ENST00000564014 471 ntBASIC14.15□□□□□ -0.14
MT-ND1P03886 SAMD11P1-201ENST00000571429 661 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms