Protein–RNA interactions for Protein: O95405

ZFYVE9, Zinc finger FYVE domain-containing protein 9, humanhuman

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE9O95405 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE9O95405 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE9O95405 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZFYVE9O95405 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZFYVE9O95405 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE9O95405 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ZFYVE9O95405 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE9O95405 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE9O95405 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.64■□□□□ 0.89
ZFYVE9O95405 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 AC106047.2-201ENST00000511723 743 ntBASIC20.63■□□□□ 0.89
ZFYVE9O95405 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 AL118522.1-201ENST00000611368 560 ntBASIC20.63■□□□□ 0.89
ZFYVE9O95405 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE9O95405 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE9O95405 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 RN7SL23P-201ENST00000484055 275 ntBASIC20.62■□□□□ 0.89
ZFYVE9O95405 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 AL133467.4-201ENST00000602953 725 ntBASIC20.62■□□□□ 0.89
ZFYVE9O95405 AP003392.6-201ENST00000607709 325 ntBASIC20.62■□□□□ 0.89
ZFYVE9O95405 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 AGGF1P1-201ENST00000509500 2073 ntBASIC20.62■□□□□ 0.89
ZFYVE9O95405 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.62■□□□□ 0.89
ZFYVE9O95405 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE9O95405 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 AC098934.1-203ENST00000442868 1262 ntBASIC20.61■□□□□ 0.89
ZFYVE9O95405 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE9O95405 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE9O95405 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 RN7SL564P-201ENST00000496309 250 ntBASIC20.61■□□□□ 0.89
ZFYVE9O95405 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.61■□□□□ 0.89
ZFYVE9O95405 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 AC226150.1-201ENST00000544259 466 ntBASIC20.61■□□□□ 0.89
ZFYVE9O95405 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 AP001527.2-201ENST00000614441 631 ntBASIC20.61■□□□□ 0.89
ZFYVE9O95405 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE9O95405 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE9O95405 AC138035.3-201ENST00000622706 2791 ntBASIC20.61■□□□□ 0.89
ZFYVE9O95405 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE9O95405 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE9O95405 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE9O95405 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms