Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RNF8O76064 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF8O76064 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RNF8O76064 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RNF8O76064 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF8O76064 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.78■□□□□ 0.12
RNF8O76064 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF8O76064 WASH4P-201ENST00000564273 1246 ntBASIC15.78■□□□□ 0.12
RNF8O76064 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF8O76064 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 CLUHP6-201ENST00000580789 941 ntBASIC15.78■□□□□ 0.12
RNF8O76064 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 AC092364.2-202ENST00000597012 1073 ntBASIC15.78■□□□□ 0.12
RNF8O76064 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF8O76064 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF8O76064 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF8O76064 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF8O76064 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF8O76064 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF8O76064 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF8O76064 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF8O76064 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF8O76064 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF8O76064 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF8O76064 DGCR5-201ENST00000399539 862 ntBASIC15.77■□□□□ 0.12
RNF8O76064 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF8O76064 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF8O76064 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF8O76064 AC093433.1-201ENST00000458048 571 ntBASIC15.77■□□□□ 0.12
RNF8O76064 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF8O76064 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF8O76064 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF8O76064 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.77■□□□□ 0.12
RNF8O76064 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF8O76064 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
RNF8O76064 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF8O76064 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RNF8O76064 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RNF8O76064 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RNF8O76064 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF8O76064 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF8O76064 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF8O76064 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF8O76064 AC113367.3-201ENST00000508316 1912 ntBASIC15.76■□□□□ 0.11
RNF8O76064 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RNF8O76064 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF8O76064 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNF8O76064 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RNF8O76064 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 KRT8P35-201ENST00000483942 1338 ntBASIC15.76■□□□□ 0.11
RNF8O76064 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF8O76064 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF8O76064 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms