Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LGR5O75473 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.5■□□□□ 0.23
LGR5O75473 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.5■□□□□ 0.23
LGR5O75473 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.5■□□□□ 0.23
LGR5O75473 AL645933.1-201ENST00000440087 609 ntBASIC16.5■□□□□ 0.23
LGR5O75473 RPS2P36-201ENST00000456516 831 ntBASIC16.5■□□□□ 0.23
LGR5O75473 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 AC125604.1-201ENST00000496255 707 ntBASIC16.5■□□□□ 0.23
LGR5O75473 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.5■□□□□ 0.23
LGR5O75473 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
LGR5O75473 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LGR5O75473 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LGR5O75473 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.5■□□□□ 0.23
LGR5O75473 AC009884.2-201ENST00000603110 324 ntBASIC16.5■□□□□ 0.23
LGR5O75473 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 MIR6727-201ENST00000620702 65 ntBASIC16.5■□□□□ 0.23
LGR5O75473 AC128714.1-201ENST00000637035 887 ntBASIC16.5■□□□□ 0.23
LGR5O75473 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LGR5O75473 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.5■□□□□ 0.23
LGR5O75473 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 AC013726.1-201ENST00000563747 2285 ntBASIC16.5■□□□□ 0.23
LGR5O75473 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LGR5O75473 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.5■□□□□ 0.23
LGR5O75473 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.5■□□□□ 0.23
LGR5O75473 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGR5O75473 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.49■□□□□ 0.23
LGR5O75473 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.49■□□□□ 0.23
LGR5O75473 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LGR5O75473 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.49■□□□□ 0.23
LGR5O75473 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
LGR5O75473 ACTG1P2-201ENST00000415776 1125 ntBASIC16.49■□□□□ 0.23
LGR5O75473 ACTG1P11-201ENST00000425411 1125 ntBASIC16.49■□□□□ 0.23
LGR5O75473 NUP210P1-202ENST00000504322 710 ntBASIC16.49■□□□□ 0.23
LGR5O75473 SCARNA21-201ENST00000517026 139 ntBASIC16.49■□□□□ 0.23
LGR5O75473 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.49■□□□□ 0.23
LGR5O75473 AC009779.1-201ENST00000551138 283 ntBASIC16.49■□□□□ 0.23
LGR5O75473 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.49■□□□□ 0.23
LGR5O75473 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.49■□□□□ 0.23
LGR5O75473 AC005962.1-201ENST00000584100 773 ntBASIC16.49■□□□□ 0.23
LGR5O75473 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LGR5O75473 AL805961.1-203ENST00000641078 1258 ntBASIC16.49■□□□□ 0.23
LGR5O75473 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.49■□□□□ 0.23
LGR5O75473 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LGR5O75473 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 AGAP7P-201ENST00000582299 2062 ntBASIC16.49■□□□□ 0.23
LGR5O75473 AGAP14-201ENST00000624701 2060 ntBASIC16.49■□□□□ 0.23
LGR5O75473 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LGR5O75473 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGR5O75473 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.48■□□□□ 0.23
LGR5O75473 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.48■□□□□ 0.23
LGR5O75473 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.48■□□□□ 0.23
LGR5O75473 MRPL37P1-201ENST00000592451 1337 ntBASIC16.48■□□□□ 0.23
LGR5O75473 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.48■□□□□ 0.23
LGR5O75473 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LGR5O75473 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGR5O75473 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms