Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.46□□□□□ -0.09
SEC22BO75396 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC22BO75396 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC22BO75396 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SEC22BO75396 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.46□□□□□ -0.1
SEC22BO75396 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC22BO75396 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC22BO75396 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.46□□□□□ -0.1
SEC22BO75396 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.46□□□□□ -0.1
SEC22BO75396 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SEC22BO75396 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 AC006504.5-208ENST00000588784 2401 ntBASIC14.45□□□□□ -0.1
SEC22BO75396 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.45□□□□□ -0.1
SEC22BO75396 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.45□□□□□ -0.1
SEC22BO75396 SPDYE22P-201ENST00000582158 798 ntBASIC14.45□□□□□ -0.1
SEC22BO75396 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.45□□□□□ -0.1
SEC22BO75396 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SEC22BO75396 AC005498.2-205ENST00000593218 784 ntBASIC14.45□□□□□ -0.1
SEC22BO75396 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 MIR8072-201ENST00000614241 80 ntBASIC14.45□□□□□ -0.1
SEC22BO75396 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SEC22BO75396 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC22BO75396 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC22BO75396 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 C1QBPP1-201ENST00000400117 770 ntBASIC14.44□□□□□ -0.1
SEC22BO75396 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC22BO75396 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC22BO75396 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC22BO75396 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC22BO75396 AC093004.1-201ENST00000508850 424 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms