Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TYMSP2-201ENST00000589501 424 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AL359091.4-201ENST00000610052 409 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 PSME2-217ENST00000615264 874 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 PSME2-218ENST00000630027 185 ntTSL 3 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 CROCCP1-201ENST00000426910 5675 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AGGF1P1-201ENST00000509500 2073 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 BRD7P5-201ENST00000299197 1822 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AC020931.1-201ENST00000589622 1346 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AL008638.4-201ENST00000624792 1315 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 PSAT1P2-201ENST00000426107 972 ntBASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 AC006116.2-201ENST00000589958 988 ntBASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 AL450487.2-201ENST00000615934 407 ntBASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM88BA6NKF7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 KRT8P28-201ENST00000433288 1390 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 GRPEL2P1-201ENST00000453145 339 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 PEBP1P3-201ENST00000455475 548 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AL591471.1-201ENST00000621855 229 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AL357143.1-203ENST00000639750 881 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 AP003680.1-201ENST00000598970 3660 ntBASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM88BA6NKF7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms