Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AC068587.8-201ENST00000641239 219 ntBASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 LINC00554-201ENST00000564841 3011 ntBASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.83□□□□□ -0.04
TBC1D3FA6NER0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AC012441.2-201ENST00000444843 739 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AC104640.1-201ENST00000562617 2109 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AC008805.1-201ENST00000590892 364 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AC132192.2-201ENST00000596206 1147 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AL645939.5-201ENST00000606834 243 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AL805961.1-203ENST00000641078 1258 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AL008718.2-201ENST00000609206 1313 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 AC126177.1-201ENST00000547829 2218 ntBASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TBC1D3FA6NER0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms