Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 AL022334.2-201ENST00000610000 484 ntBASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 CAP2P1-201ENST00000557743 1390 ntBASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC144AA2RUR9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AC026803.1-201ENST00000569130 274 ntBASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AC124068.2-201ENST00000569473 1109 ntBASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 MIR5572-201ENST00000583188 137 ntBASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC144AA2RUR9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 AC092978.1-202ENST00000637590 1327 ntBASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms