Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CLUHP6-201ENST00000580789 941 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MIR4259-201ENST00000584466 101 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC107373.2-201ENST00000607735 490 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL354718.3-201ENST00000616414 581 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CR382287.1-201ENST00000623954 586 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DRD5P1-201ENST00000456605 1438 ntBASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC016694.1-201ENST00000434179 700 ntBASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC012441.1-201ENST00000446669 685 ntBASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KRT18P25-201ENST00000508931 1278 ntBASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC005252.2-201ENST00000624630 1141 ntBASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC139749.1-202ENST00000617529 3139 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 REXO1L4P-201ENST00000605109 1937 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 355.3 ms