Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 BX539320.1-201ENST00000623759 877 ntBASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 AL359881.3-201ENST00000602640 1721 ntBASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00959A0A1B0GUT2 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AL390754.1-201ENST00000619088 582 ntBASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AC004840.1-201ENST00000636359 365 ntBASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 KRT8P14-201ENST00000414254 1442 ntBASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 AC022144.1-201ENST00000602255 1580 ntBASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00959A0A1B0GUT2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms