Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 AL157407.1-201ENST00000435784 904 ntBASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 AC078991.1-201ENST00000437297 610 ntBASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 BX088702.1-201ENST00000610784 235 ntBASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 SALL4P5-201ENST00000419001 1760 ntBASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC187A0A096LP49 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.08□□□□□ -0.15
CCDC187A0A096LP49 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC187A0A096LP49 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.08□□□□□ -0.15
CCDC187A0A096LP49 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC187A0A096LP49 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 RPSAP31-201ENST00000416648 895 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AL592076.1-201ENST00000424448 303 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 RN7SL818P-201ENST00000485099 259 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC006122.1-201ENST00000493323 440 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AL031713.1-201ENST00000564813 661 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC026803.1-201ENST00000569130 274 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 RN7SL725P-201ENST00000606439 259 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC092171.5-201ENST00000608012 942 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC133540.1-201ENST00000620845 1019 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AC074138.1-201ENST00000611182 1303 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 AL359258.3-201ENST00000622910 2331 ntBASIC14.08□□□□□ -0.16
CCDC187A0A096LP49 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms