Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 CYP46A4P-201ENST00000414953 267 ntBASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 FAM58BP-201ENST00000439056 645 ntBASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 RN7SL11P-201ENST00000471305 293 ntBASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 CU633904.3-201ENST00000624042 1029 ntBASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SSR4P1-203ENST00000599569 2260 ntBASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTDP1Q9Y5B0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AL138725.1-201ENST00000407347 1314 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 E2F3P2-201ENST00000447755 1422 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AC004899.1-201ENST00000424687 1714 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 TLE1P1-201ENST00000422965 589 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AC013355.1-201ENST00000562625 723 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 BNIP3P13-201ENST00000599968 566 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AL162426.1-201ENST00000624141 743 ntBASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTDP1Q9Y5B0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms