Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 FTLP10-202ENST00000505798 471 ntBASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 AC244669.2-201ENST00000612320 853 ntBASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 AC139749.1-202ENST00000617529 3139 ntBASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4E1Q9UPM8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 FKBP4P6-201ENST00000457486 1332 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 FAM197Y7-201ENST00000432892 766 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC016694.1-201ENST00000434179 700 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AL391280.1-201ENST00000506969 1062 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC022447.6-201ENST00000515522 438 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC131206.1-201ENST00000538078 1211 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 CR383656.12-201ENST00000549567 513 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 AC020910.5-201ENST00000623668 1865 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 INE2-201ENST00000630399 1874 ntBASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4E1Q9UPM8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 AL136172.1-201ENST00000598590 1394 ntBASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 KRT43P-201ENST00000434019 910 ntBASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.49■□□□□ 0.07
AP4E1Q9UPM8 RNA5SP486-201ENST00000515961 83 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms