Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 PUDPP3-201ENST00000445368 636 ntBASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 TPT1P11-201ENST00000458482 498 ntBASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AC022447.6-201ENST00000515522 438 ntBASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 DUX4L45-201ENST00000566406 1057 ntBASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 FLJ16779-201ENST00000612722 7638 ntBASIC17■□□□□ 0.31
PCDHA4Q9UN74 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 HIST2H2BB-201ENST00000449108 381 ntBASIC17■□□□□ 0.31
PCDHA4Q9UN74 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 MFF-223ENST00000524634 647 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHA4Q9UN74 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHA4Q9UN74 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 AC005912.2-201ENST00000619492 2400 ntBASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 YBX1P6-201ENST00000442962 1002 ntBASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 BNIP3P42-201ENST00000454982 569 ntBASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDHA4Q9UN74 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms