Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 RPL7P35-201ENST00000446943 740 ntBASIC17.13■□□□□ 0.33
PNMA3Q9UL41 CICP12-201ENST00000455801 843 ntBASIC17.13■□□□□ 0.33
PNMA3Q9UL41 AC006122.1-201ENST00000493323 440 ntBASIC17.13■□□□□ 0.33
PNMA3Q9UL41 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 AC087045.2-201ENST00000606279 1003 ntBASIC17.13■□□□□ 0.33
PNMA3Q9UL41 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC17.13■□□□□ 0.33
PNMA3Q9UL41 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
PNMA3Q9UL41 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 RPS9P1-201ENST00000419943 583 ntBASIC17.12■□□□□ 0.33
PNMA3Q9UL41 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 AC026320.2-201ENST00000434379 478 ntBASIC17.12■□□□□ 0.33
PNMA3Q9UL41 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 AL109837.1-201ENST00000603272 613 ntBASIC17.12■□□□□ 0.33
PNMA3Q9UL41 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 MIR6769A-201ENST00000617340 73 ntBASIC17.12■□□□□ 0.33
PNMA3Q9UL41 AC133540.1-201ENST00000620845 1019 ntBASIC17.12■□□□□ 0.33
PNMA3Q9UL41 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
PNMA3Q9UL41 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AC144522.1-201ENST00000625111 1658 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 SALL4P5-201ENST00000419001 1760 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 OR2K2-202ENST00000374428 1038 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AL355334.1-201ENST00000417713 215 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 RPL8P2-201ENST00000430538 502 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AC135983.4-201ENST00000564116 1262 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 LINC01783-202ENST00000614408 828 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 BX284668.2-205ENST00000619677 828 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AL359258.3-201ENST00000622910 2331 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 ZBED1P1-201ENST00000502364 1930 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 CAP2P1-201ENST00000557743 1390 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.11■□□□□ 0.33
PNMA3Q9UL41 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNMA3Q9UL41 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms