Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 AC073413.1-201ENST00000603927 732 ntBASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC023024.2-201ENST00000623561 1993 ntBASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC126915.1-201ENST00000522847 1038 ntBASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC126365.1-201ENST00000578585 1514 ntBASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 AC104581.4-201ENST00000623126 3052 ntBASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC6Q9UBN7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.89■□□□□ 0.3
HDAC6Q9UBN7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.89■□□□□ 0.3
HDAC6Q9UBN7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HDAC6Q9UBN7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 AJ011931.1-201ENST00000618749 2492 ntBASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 KRT8P4-201ENST00000509735 1454 ntBASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC6Q9UBN7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms