Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 C2orf27AP3-201ENST00000434123 579 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 HILS1-202ENST00000545329 423 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 MIR6805-201ENST00000615055 62 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 AL354718.3-201ENST00000616414 581 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 CR382287.1-201ENST00000623954 586 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 KRT8P35-201ENST00000483942 1338 ntBASIC14.04□□□□□ -0.16
CNIH4Q9P003 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNIH4Q9P003 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.04□□□□□ -0.16
CNIH4Q9P003 AC007326.2-201ENST00000624224 7579 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AC092933.1-201ENST00000393644 945 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 ACTBP8-201ENST00000403258 1108 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 AL139094.1-201ENST00000405549 1188 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 KLF2P2-201ENST00000416807 1039 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 AC016694.1-201ENST00000434179 700 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AP005482.1-201ENST00000563722 1273 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AL603764.1-201ENST00000636452 321 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AL158070.2-201ENST00000623713 1621 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms