Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 DUX4L47-201ENST00000566374 394 ntBASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 RN7SL48P-201ENST00000579283 293 ntBASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PARPBPQ9NWS1 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 REXO1L2P-201ENST00000425429 2069 ntBASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
PARPBPQ9NWS1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 GRK6P1-201ENST00000400595 1711 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 TPM3P8-201ENST00000330554 643 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AC234783.1-201ENST00000441761 496 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 GPR53P-205ENST00000457298 1084 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 KRT17P8-201ENST00000540749 863 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 RAB43P1-201ENST00000561790 589 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.45□□□□□ -0.26
PARPBPQ9NWS1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MSTO2P-201ENST00000314835 1709 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms