Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AP001267.2-201ENST00000532619 2086 ntBASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AC041040.2-201ENST00000622926 2899 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AC152010.1-201ENST00000415779 2006 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AC236430.1-201ENST00000402231 743 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 SPTLC1P1-201ENST00000447199 261 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AC004066.1-201ENST00000502488 802 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 SERBP1P5-201ENST00000510079 1181 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 TPRX2P-201ENST00000535362 881 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RRP7BP-205ENST00000566851 833 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 RN7SL204P-201ENST00000582831 262 ntBASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LIN7CQ9NUP9 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AL391825.1-201ENST00000457671 1364 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AC018665.1-201ENST00000622927 1362 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 SPDYE19P-201ENST00000338590 713 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms