Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CD248Q9HCU0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD248Q9HCU0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD248Q9HCU0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CD248Q9HCU0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.83■□□□□ 0.13
CD248Q9HCU0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 BAATP1-201ENST00000412284 1225 ntBASIC15.83■□□□□ 0.12
CD248Q9HCU0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 AC093433.1-201ENST00000458048 571 ntBASIC15.83■□□□□ 0.12
CD248Q9HCU0 KRT18P43-201ENST00000469825 1281 ntBASIC15.83■□□□□ 0.12
CD248Q9HCU0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 RNA5SP412-201ENST00000516234 123 ntBASIC15.83■□□□□ 0.12
CD248Q9HCU0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 MIR4538-201ENST00000581377 78 ntBASIC15.83■□□□□ 0.12
CD248Q9HCU0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.83■□□□□ 0.12
CD248Q9HCU0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD248Q9HCU0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 AP001063.1-201ENST00000568332 529 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 AC009486.1-201ENST00000569860 813 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 MIR4525-201ENST00000580000 75 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 GNRHR2-203ENST00000581100 1187 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 TUBB1P2-201ENST00000422712 1306 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 TUBB1P1-201ENST00000503144 1300 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 DRD5P1-201ENST00000456605 1438 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.82■□□□□ 0.12
CD248Q9HCU0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 TCAF1P1-201ENST00000414990 2232 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms