Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC023824.1-201ENST00000562945 2975 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 AC007292.2-201ENST00000593524 1812 ntBASIC5.07□□□□□ -1.6
KRTAP4-3Q9BYR4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC004899.1-201ENST00000424687 1714 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC008132.1-202ENST00000342005 1389 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL138725.1-201ENST00000407347 1314 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL645937.2-201ENST00000396808 931 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 KRTAP19-9P-201ENST00000421795 191 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL354877.1-201ENST00000424412 413 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 BX284668.4-201ENST00000453917 508 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SERPINA13P-202ENST00000478994 924 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 RNA5SP423-201ENST00000517127 109 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC126915.1-201ENST00000522847 1038 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms