Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ELK2AP-201ENST00000392510 1007 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 MESTP3-201ENST00000503460 968 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AC044849.1-201ENST00000519737 1188 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AC005730.2-201ENST00000564549 1184 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AC091812.3-201ENST00000621362 345 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AP001002.3-201ENST00000623482 206 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 AC138466.3-201ENST00000619983 221 ntBASIC18.04■□□□□ 0.48
RPAP1Q9BWH6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 BX640514.1-201ENST00000583223 1918 ntBASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 RN7SL190P-201ENST00000582519 257 ntBASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 AC097359.2-201ENST00000604992 2389 ntBASIC18.03■□□□□ 0.48
RPAP1Q9BWH6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPAP1Q9BWH6 AC139749.1-202ENST00000617529 3139 ntBASIC18.02■□□□□ 0.48
RPAP1Q9BWH6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPAP1Q9BWH6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms