Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 AC044860.1-202ENST00000559481 777 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 AC000095.1-201ENST00000603208 874 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.41□□□□□ -0.58
VGLL1Q99990 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
VGLL1Q99990 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.41□□□□□ -0.58
VGLL1Q99990 AC018665.1-201ENST00000622927 1362 ntBASIC11.41□□□□□ -0.58
VGLL1Q99990 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VGLL1Q99990 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
VGLL1Q99990 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.4□□□□□ -0.58
VGLL1Q99990 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC027612.4-201ENST00000605371 583 ntBASIC11.4□□□□□ -0.58
VGLL1Q99990 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC004461.2-201ENST00000629517 803 ntBASIC11.4□□□□□ -0.58
VGLL1Q99990 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
VGLL1Q99990 AC055811.4-201ENST00000624039 1754 ntBASIC11.4□□□□□ -0.58
VGLL1Q99990 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.4□□□□□ -0.58
VGLL1Q99990 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VGLL1Q99990 PEG13-201ENST00000631594 5667 ntBASIC11.4□□□□□ -0.58
VGLL1Q99990 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
VGLL1Q99990 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
VGLL1Q99990 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.4□□□□□ -0.59
VGLL1Q99990 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
VGLL1Q99990 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.4□□□□□ -0.59
VGLL1Q99990 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.4□□□□□ -0.59
VGLL1Q99990 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
VGLL1Q99990 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VGLL1Q99990 AC092135.3-201ENST00000624151 1846 ntBASIC11.39□□□□□ -0.59
VGLL1Q99990 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms