Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 C1QBPP1-201ENST00000400117 770 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 KRT43P-201ENST00000434019 910 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.32□□□□□ -0.28
VRK1Q99986 VDAC1P7-201ENST00000462417 847 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
VRK1Q99986 BRI3BPP1-201ENST00000594224 787 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 MIR6805-201ENST00000615055 62 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 AL121723.1-201ENST00000445194 1519 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 AC126365.1-201ENST00000578585 1514 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 AC148477.4-201ENST00000613430 1793 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.31□□□□□ -0.28
VRK1Q99986 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 AC007274.1-201ENST00000439805 662 ntBASIC13.31□□□□□ -0.28
VRK1Q99986 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.31□□□□□ -0.28
VRK1Q99986 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.31□□□□□ -0.28
VRK1Q99986 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.31□□□□□ -0.28
VRK1Q99986 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.31□□□□□ -0.28
VRK1Q99986 AC106886.1-201ENST00000568660 600 ntBASIC13.31□□□□□ -0.28
VRK1Q99986 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.31□□□□□ -0.28
VRK1Q99986 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.31□□□□□ -0.28
VRK1Q99986 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms