Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 AL133267.1-201ENST00000398220 340 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 RAB43P1-201ENST00000561790 589 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 AC017083.2-201ENST00000608069 979 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 CU634019.7-201ENST00000624153 1185 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 FP236241.2-201ENST00000624906 1185 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 AC118758.2-201ENST00000614242 2813 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF2Q99805 PTENP1-202ENST00000532280 3996 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 INTS4P2-202ENST00000614726 2019 ntBASIC13.97□□□□□ -0.17
TM9SF2Q99805 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF2Q99805 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.96□□□□□ -0.17
TM9SF2Q99805 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 AC027601.5-201ENST00000624065 2482 ntBASIC13.96□□□□□ -0.17
TM9SF2Q99805 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 ARSEP1-201ENST00000420443 635 ntBASIC13.96□□□□□ -0.17
TM9SF2Q99805 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.96□□□□□ -0.17
TM9SF2Q99805 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF2Q99805 IGHV3-71-201ENST00000523324 359 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms