Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC6Q99741 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC6Q99741 AL138725.1-201ENST00000407347 1314 ntBASIC14.39□□□□□ -0.11
CDC6Q99741 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC6Q99741 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC6Q99741 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC6Q99741 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC6Q99741 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC6Q99741 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC6Q99741 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDC6Q99741 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDC6Q99741 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 AL137783.1-201ENST00000623494 1896 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 AC020910.5-201ENST00000623668 1865 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDC6Q99741 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC6Q99741 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC6Q99741 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 AL035414.1-201ENST00000451327 857 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 CTBP2P4-201ENST00000513884 920 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC6Q99741 MIR4649-201ENST00000582839 64 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC6Q99741 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 YRDCP1-201ENST00000621419 643 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 AL365203.3-201ENST00000609742 2057 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 AL157414.3-201ENST00000624276 1954 ntBASIC14.38□□□□□ -0.11
CDC6Q99741 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CDC6Q99741 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC6Q99741 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC6Q99741 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 AC099063.4-201ENST00000641099 1602 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDC6Q99741 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 OR2K2-202ENST00000374428 1038 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 TLE1P1-201ENST00000422965 589 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms