Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL13Q99616 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL13Q99616 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL13Q99616 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 SALL4P5-201ENST00000419001 1760 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 AC018442.1-201ENST00000421439 2061 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 AL354989.2-201ENST00000435838 1540 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 GK-202ENST00000378941 458 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL13Q99616 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL13Q99616 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
CCL13Q99616 CNN2P8-201ENST00000421872 913 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 AC007969.1-201ENST00000433675 447 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 RPL7P3-201ENST00000441388 714 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL13Q99616 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL13Q99616 IGHV3-71-201ENST00000523324 359 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 SNX29P1-201ENST00000548357 1007 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL13Q99616 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.54□□□□□ -0.4
CCL13Q99616 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 MIR6775-201ENST00000617557 69 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 AC138466.3-201ENST00000619983 221 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL13Q99616 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL13Q99616 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL13Q99616 FKBP4P6-201ENST00000457486 1332 ntBASIC12.54□□□□□ -0.4
CCL13Q99616 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL13Q99616 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL13Q99616 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL13Q99616 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL13Q99616 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL13Q99616 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms