Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AC097493.3-201ENST00000509725 367 ntBASIC12.01□□□□□ -0.49
RNF2Q99496 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.01□□□□□ -0.49
RNF2Q99496 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF2Q99496 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
RNF2Q99496 AL158211.3-201ENST00000607385 239 ntBASIC12.01□□□□□ -0.49
RNF2Q99496 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 AC093512.1-201ENST00000617969 520 ntBASIC12.01□□□□□ -0.49
RNF2Q99496 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 AC099521.3-201ENST00000624251 2938 ntBASIC12.01□□□□□ -0.49
RNF2Q99496 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12□□□□□ -0.49
RNF2Q99496 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12□□□□□ -0.49
RNF2Q99496 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12□□□□□ -0.49
RNF2Q99496 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12□□□□□ -0.49
RNF2Q99496 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12□□□□□ -0.49
RNF2Q99496 PMS2P2-201ENST00000425039 1128 ntBASIC12□□□□□ -0.49
RNF2Q99496 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 AC092580.3-201ENST00000430932 139 ntBASIC12□□□□□ -0.49
RNF2Q99496 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 RN7SL618P-201ENST00000477850 296 ntBASIC12□□□□□ -0.49
RNF2Q99496 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12□□□□□ -0.49
RNF2Q99496 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12□□□□□ -0.49
RNF2Q99496 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12□□□□□ -0.49
RNF2Q99496 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 MTHFR-210ENST00000641407 2387 ntBASIC12□□□□□ -0.49
RNF2Q99496 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12□□□□□ -0.49
RNF2Q99496 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RNF2Q99496 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF2Q99496 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.99□□□□□ -0.49
RNF2Q99496 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RNF2Q99496 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms