Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 AC084781.1-201ENST00000613737 656 ntBASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 AC006480.2-201ENST00000609770 1337 ntBASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 BRD7P5-201ENST00000299197 1822 ntBASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP2Q96SN8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 AC215219.1-201ENST00000400706 1817 ntBASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 LAP3P2-201ENST00000454686 1454 ntBASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 BANF1P3-201ENST00000412556 261 ntBASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 TNRC18P2-201ENST00000417666 2714 ntBASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 AL807761.2-201ENST00000422849 729 ntBASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 AL512306.1-201ENST00000432698 848 ntBASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP2Q96SN8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 AL627422.1-201ENST00000434104 580 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 CTBP2P4-201ENST00000513884 920 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 AC114947.1-202ENST00000514136 344 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 POU5F1P2-201ENST00000521750 823 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 MIR5572-201ENST00000583188 137 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 MIR6074-201ENST00000612054 107 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 MARK2P16-201ENST00000605714 1723 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 AGGF1P1-201ENST00000509500 2073 ntBASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP2Q96SN8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms